Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810861.1_cds_XP_016496405.1_10628
CDS Infomation

[gene=LOC107815350] [db_xref=GeneID:107815350] [protein=rop guanine nucleotide exchange factor 12-like] [protein_id=XP_016496405.1] [location=complement(join(73853..74278,74513..74833,74917..75177,75292..75366,75457..75611,75782..75898,76143..76293))] [gbkey=CDS]
Sequence

ATGGTTCGAGCACTAGAGGAAGAGAAAGAGATTCCATCTGCTGAATCTCAAAAGGTTAAT
GGGTTGAAGCTTCTTCGTAAAGAGACCATCAGGTCACGTAATAAAGCCGATGATTCAGGC
TCCGCTATCATCAACCAGAACCAGCCTTCAGATATGGAGCTGATGAAGGAAAAATTTGCC
AAGTTGCTCCTTGGTGAGGATATGTCTGGCGGAGGAAAGGGTGTTTCATCAGCATTGGCA
TTGTCAAATGCAATCACAAACTTAGCAGCTTCTGCATTTGGGGAACAGAAGAGATTAGAG
CCCATGCAACCAGAGATAAAAGCCAAGTGGAGAAAAGAAATTGATTGGCTTTTATCTGTT
ACAGATCACATTGTTGAATTTATTCCTTCTAAACAAAAATCAAAGGATGGAACAAACATG
GAGATTATGGTGACAAAGCAGAGAACTGATCTTCAAATGAACATCCCAGCACTACGCAAA
CTAGACGCGATGCTTCTGGATTGCTTAGATAGTTTTAGAGACCAAAGTGAAATCTCTTAT
ACATCGAAGGATGAAGAAGGAAAAAACAGCAGGGCAGATGACAAATGGTGGATACCTACA
CCTAAGGTTCCCCCTAATGGTTTGTCCGATGCAACAAGAAAATGGCTGCAATTTCAAAAA
GATTCTGTAAACCAAGTACATAAAGCAGCCATGGCCATAAATGCTCAAGTTCTAACAGAA
ATGGAGGTCCCTGAAAATTATATAGAATACCTACCAAAGAATGGGAGAGCAAGCCTTGGA
GATTCGATATATAGGAGTATCACTGATGAATACTTTGATCCTGATTACTTCCTTTCGACT
ATGGACTTGTCTTCAGAACATAAAATTTTAGACCTCAAAAACAGGATTGAGGCTTCTGTT
ATTATATGGAGAAGAAAAATGAATGCTAAAGATGGGAAATCAGCCTGGGGTTCAGCCGTT
AGTATGGAGAAGAGAGAATTATTTGAAGAAAGGGCAGAGACTATCTTGCTTATCCTAAAG
CATCGGTTCCCTGGAATTCCTCAGTCATCACTAGACATAAGCAAAATCCAATACAACAGA
GACGTGGGGCAAGCTATTTTAGAAAGCTATTCGAGAATAATTGAAAGCAGGGCATATACA
GTCATGTCACGAATCGAAGATGTTCTCCAAGCAGATGCTGTGGCCCAAAATCCTTCCAAC
GGAGAGGTAAAGAGGTTTCCTGGAGATGATTCCTTAGGGGTCGCAGCATCAGAAACATTC
CCGGACGGTAAGGAAGAAGTAGAGAAGCTTAATTCTGCAGAAACTCCTAATTCAATGACA
CTGCTGGATTTCATGGGTTGGGGAGCGGAACAAGGAGATGATGATGCTGAGAAAGACTTG
AAGGAGGACCGAACCAAAGACACTGATGGGAAGCTCCTAAGCAAACCTCCAAATATAGTC
ACTAATAAGAGAGTTTCTTACCTAGAGAATTTAGCTGGTTCCAGAAGTCCAACGGCACGT
CACTAA

Peptide Sequence

PEP ID

XP_016496405.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 12-like [Nicotiana tabacum]
Sequence

MVRALEEEKEIPSAESQKVNGLKLLRKETIRSRNKADDSGSAIINQNQPSDMELMKEKFA
KLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQKRLEPMQPEIKAKWRKEIDWLLSV
TDHIVEFIPSKQKSKDGTNMEIMVTKQRTDLQMNIPALRKLDAMLLDCLDSFRDQSEISY
TSKDEEGKNSRADDKWWIPTPKVPPNGLSDATRKWLQFQKDSVNQVHKAAMAINAQVLTE
MEVPENYIEYLPKNGRASLGDSIYRSITDEYFDPDYFLSTMDLSSEHKILDLKNRIEASV
IIWRRKMNAKDGKSAWGSAVSMEKRELFEERAETILLILKHRFPGIPQSSLDISKIQYNR
DVGQAILESYSRIIESRAYTVMSRIEDVLQADAVAQNPSNGEVKRFPGDDSLGVAASETF
PDGKEEVEKLNSAETPNSMTLLDFMGWGAEQGDDDAEKDLKEDRTKDTDGKLLSKPPNIV
TNKRVSYLENLAGSRSPTARH

Transcript Sequence

Gene sequence data has not been registered.